J3_7ZW0_043
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UAGAUG*CAUAGCAGG*CGAAUUGCAAUGUCA
- Length
- 30 nucleotides
- Bulged bases
- 7ZW0|1|LA|A|3172, 7ZW0|1|LA|G|3173, 7ZW0|1|LA|A|3215, 7ZW0|1|LA|G|3216, 7ZW0|1|LA|G|3219, 7ZW0|1|LA|A|3268, 7ZW0|1|LA|U|3270, 7ZW0|1|LA|C|3272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZW0_043 not in the Motif Atlas
- Homologous match to J3_8P9A_064
- Geometric discrepancy: 0.1822
- The information below is about J3_8P9A_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03190.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-F-F-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7ZW0|1|LA|U|3171
7ZW0|1|LA|A|3172
7ZW0|1|LA|G|3173
7ZW0|1|LA|A|3174
7ZW0|1|LA|U|3175
7ZW0|1|LA|G|3176
*
7ZW0|1|LA|C|3212
7ZW0|1|LA|A|3213
7ZW0|1|LA|U|3214
7ZW0|1|LA|A|3215
7ZW0|1|LA|G|3216
7ZW0|1|LA|C|3217
7ZW0|1|LA|A|3218
7ZW0|1|LA|G|3219
7ZW0|1|LA|G|3220
*
7ZW0|1|LA|C|3265
7ZW0|1|LA|G|3266
7ZW0|1|LA|A|3267
7ZW0|1|LA|A|3268
7ZW0|1|LA|U|3269
7ZW0|1|LA|U|3270
7ZW0|1|LA|G|3271
7ZW0|1|LA|C|3272
7ZW0|1|LA|A|3273
7ZW0|1|LA|A|3274
7ZW0|1|LA|U|3275
7ZW0|1|LA|G|3276
7ZW0|1|LA|U|3277
7ZW0|1|LA|C|3278
7ZW0|1|LA|A|3279
Current chains
- Chain LA
- 25S ribosomal RNA (RDN25-1)
Nearby chains
- Chain LI
- 60S ribosomal protein L6-B
- Chain LP
- 60S ribosomal protein L14-A
- Chain LR
- 60S ribosomal protein L16-A
- Chain LS
- 60S ribosomal protein L17-A
- Chain Li
- 60S ribosomal protein L33-A
Coloring options: