J3_8A3D_015
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CA(PSU)UCG*CCUGCUU*AAGG
- Length
- 17 nucleotides
- Bulged bases
- 8A3D|1|A|U|4988, 8A3D|1|A|A|5061
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8A3D|1|A|C|4970
8A3D|1|A|A|4971
8A3D|1|A|PSU|4972
8A3D|1|A|U|4973
8A3D|1|A|C|4974
8A3D|1|A|G|4975
*
8A3D|1|A|C|4983
8A3D|1|A|C|4984
8A3D|1|A|U|4985
8A3D|1|A|G|4986
8A3D|1|A|C|4987
8A3D|1|A|U|4988
8A3D|1|A|U|4991
*
8A3D|1|A|A|5060
8A3D|1|A|A|5061
8A3D|1|A|G|5062
8A3D|1|A|G|5063
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L3
- Chain J
- 60S ribosomal protein L17
- Chain X
- 60S ribosomal protein L31
Coloring options: