J3_8A57_011

3D structure

PDB id

8A57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

AUC*GUC*GGGAACGGAAGU

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A57|1|A|A|1494
8A57|1|A|U|1495
8A57|1|A|C|1496
*
8A57|1|A|G|1515
8A57|1|A|U|1516
8A57|1|A|C|1517
*
8A57|1|A|G|1576
8A57|1|A|G|1577
8A57|1|A|G|1578
8A57|1|A|A|1579
8A57|1|A|A|1580
8A57|1|A|C|1593
8A57|1|A|G|1594
8A57|1|A|G|1595
8A57|1|A|A|1596
8A57|1|A|A|1597
8A57|1|A|G|1598
8A57|1|A|U|1599

Current chains

Chain A

23S ribosomal RNA

Nearby chains