J3_8A57_021

3D structure

PDB id

8A57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CCAGGA*UUGAAAG*CACUGG

Length

19 nucleotides

Bulged bases

8A57|1|A|A|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A57|1|A|C|1098
8A57|1|A|C|1099
8A57|1|A|A|1100
8A57|1|A|G|1101
8A57|1|A|G|1102
8A57|1|A|A|1103
*
8A57|1|A|U|1127
8A57|1|A|U|1128
8A57|1|A|G|1129
8A57|1|A|A|1130
8A57|1|A|A|1131
8A57|1|A|A|1132
8A57|1|A|G|1133
*
8A57|1|A|C|1148
8A57|1|A|A|1149
8A57|1|A|C|1150
8A57|1|A|U|1151
8A57|1|A|G|1152
8A57|1|A|G|1153

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L11