J3_8ANY_011

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

8ANY|1|AA|U|1229, 8ANY|1|AA|C|1230, 8ANY|1|AA|A|1232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ANY|1|AA|U|1210
8ANY|1|AA|G|1211
8ANY|1|AA|U|1212
8ANY|1|AA|A|1213
8ANY|1|AA|A|1214
8ANY|1|AA|U|1215
8ANY|1|AA|C|1216
*
8ANY|1|AA|G|1227
8ANY|1|AA|A|1228
8ANY|1|AA|U|1229
8ANY|1|AA|C|1230
8ANY|1|AA|A|1231
8ANY|1|AA|A|1232
8ANY|1|AA|C|1233
8ANY|1|AA|C|1234
8ANY|1|AA|U|1235
8ANY|1|AA|C|1236
8ANY|1|AA|A|1237
8ANY|1|AA|C|1238
*
8ANY|1|AA|G|1351
8ANY|1|AA|C|1352
8ANY|1|AA|A|1353
8ANY|1|AA|A|1354

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain 8

39S ribosomal protein L40, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain Aw

A/A-tRNA