J3_8ANY_013

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

8ANY|1|AA|U|1369, 8ANY|1|AA|C|1385, 8ANY|1|AA|U|1386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ANY|1|AA|C|1366
8ANY|1|AA|A|1367
8ANY|1|AA|U|1368
8ANY|1|AA|U|1369
8ANY|1|AA|U|1370
*
8ANY|1|AA|A|1382
8ANY|1|AA|A|1383
8ANY|1|AA|A|1384
8ANY|1|AA|C|1385
8ANY|1|AA|U|1386
8ANY|1|AA|A|1387
8ANY|1|AA|C|1388
*
8ANY|1|AA|G|1418
8ANY|1|AA|G|1419
8ANY|1|AA|U|1420
8ANY|1|AA|G|1421

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial

Chain e

39S ribosomal protein L46, mitochondrial

Chain f

39S ribosomal protein L48, mitochondrial