J3_8ANY_015
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- AAAAUUUAACACCCAU*AUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 59 nucleotides
- Bulged bases
- 8ANY|1|A|A|2154, 8ANY|1|A|U|2159, 8ANY|1|A|C|2219, 8ANY|1|A|C|2221, 8ANY|1|A|C|2224, 8ANY|1|A|U|2233, 8ANY|1|A|C|2234, 8ANY|1|A|A|2241, 8ANY|1|A|U|2242, 8ANY|1|A|A|2243, 8ANY|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ANY|1|A|A|2153
8ANY|1|A|A|2154
8ANY|1|A|A|2155
8ANY|1|A|A|2156
8ANY|1|A|U|2157
8ANY|1|A|U|2158
8ANY|1|A|U|2159
8ANY|1|A|A|2160
8ANY|1|A|A|2161
8ANY|1|A|C|2162
8ANY|1|A|A|2163
8ANY|1|A|C|2164
8ANY|1|A|C|2165
8ANY|1|A|C|2166
8ANY|1|A|A|2167
8ANY|1|A|U|2168
*
8ANY|1|A|A|2192
8ANY|1|A|U|2193
8ANY|1|A|U|2194
8ANY|1|A|A|2195
8ANY|1|A|A|2196
8ANY|1|A|G|2197
*
8ANY|1|A|C|2212
8ANY|1|A|A|2213
8ANY|1|A|A|2214
8ANY|1|A|C|2215
8ANY|1|A|A|2216
8ANY|1|A|C|2217
8ANY|1|A|C|2218
8ANY|1|A|C|2219
8ANY|1|A|A|2220
8ANY|1|A|C|2221
8ANY|1|A|U|2222
8ANY|1|A|A|2223
8ANY|1|A|C|2224
8ANY|1|A|C|2225
8ANY|1|A|U|2226
8ANY|1|A|A|2227
8ANY|1|A|A|2228
8ANY|1|A|A|2229
8ANY|1|A|A|2230
8ANY|1|A|A|2231
8ANY|1|A|A|2232
8ANY|1|A|U|2233
8ANY|1|A|C|2234
8ANY|1|A|C|2235
8ANY|1|A|C|2236
8ANY|1|A|A|2237
8ANY|1|A|A|2238
8ANY|1|A|A|2239
8ANY|1|A|C|2240
8ANY|1|A|A|2241
8ANY|1|A|U|2242
8ANY|1|A|A|2243
8ANY|1|A|U|2244
8ANY|1|A|A|2245
8ANY|1|A|A|2246
8ANY|1|A|C|2247
8ANY|1|A|U|2248
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: