J3_8B7Y_040

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGA*UUUAAAGAAA*UCAC

Length

17 nucleotides

Bulged bases

8B7Y|1|I|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B7Y|1|I|G|1055
8B7Y|1|I|G|1056
8B7Y|1|I|A|1057
*
8B7Y|1|I|U|1081
8B7Y|1|I|U|1082
8B7Y|1|I|U|1083
8B7Y|1|I|A|1084
8B7Y|1|I|A|1085
8B7Y|1|I|A|1086
8B7Y|1|I|G|1087
8B7Y|1|I|A|1088
8B7Y|1|I|A|1089
8B7Y|1|I|A|1090
*
8B7Y|1|I|U|1101
8B7Y|1|I|C|1102
8B7Y|1|I|A|1103
8B7Y|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain m

50S ribosomal protein L36