3D structure

PDB id
8BF7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
GUCUUGACAU*ACAG*CUUACGAC
Length
22 nucleotides
Bulged bases
8BF7|1|2|U|1212, 8BF7|1|2|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BF7|1|2|G|988
8BF7|1|2|U|989
8BF7|1|2|C|990
8BF7|1|2|U|991
8BF7|1|2|U|992
8BF7|1|2|G|993
8BF7|1|2|A|994
8BF7|1|2|C|995
8BF7|1|2|A|996
8BF7|1|2|U|997
*
8BF7|1|2|A|1044
8BF7|1|2|C|1045
8BF7|1|2|A|1046
8BF7|1|2|G|1047
*
8BF7|1|2|C|1210
8BF7|1|2|U|1211
8BF7|1|2|U|1212
8BF7|1|2|A|1213
8BF7|1|2|C|1214
8BF7|1|2|G|1215
8BF7|1|2|A|1216
8BF7|1|2|C|1217

Current chains

Chain 2
16S rRNA RRSB-RRNA

Nearby chains

Chain r
30S ribosomal protein S14
Chain w
30S ribosomal protein S19

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1948 s
Application loaded.