J3_8BGH_027

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

GC*GGAAUAUUG*CAGC

Length

15 nucleotides

Bulged bases

8BGH|1|2|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|2|G|46
8BGH|1|2|C|47
*
8BGH|1|2|G|361
8BGH|1|2|G|362
8BGH|1|2|A|363
8BGH|1|2|A|364
8BGH|1|2|U|365
8BGH|1|2|A|366
8BGH|1|2|U|367
8BGH|1|2|U|368
8BGH|1|2|G|369
*
8BGH|1|2|C|392
8BGH|1|2|A|393
8BGH|1|2|G|394
8BGH|1|2|C|395

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain p

30S ribosomal protein S12

Chain t

30S ribosomal protein S16