J3_8BH4_033

3D structure

PDB id

8BH4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GUCUUGACAU*ACAG*CUUACGAC

Length

22 nucleotides

Bulged bases

8BH4|1|2|U|1212, 8BH4|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH4|1|2|G|988
8BH4|1|2|U|989
8BH4|1|2|C|990
8BH4|1|2|U|991
8BH4|1|2|U|992
8BH4|1|2|G|993
8BH4|1|2|A|994
8BH4|1|2|C|995
8BH4|1|2|A|996
8BH4|1|2|U|997
*
8BH4|1|2|A|1044
8BH4|1|2|C|1045
8BH4|1|2|A|1046
8BH4|1|2|G|1047
*
8BH4|1|2|C|1210
8BH4|1|2|U|1211
8BH4|1|2|U|1212
8BH4|1|2|A|1213
8BH4|1|2|C|1214
8BH4|1|2|G|1215
8BH4|1|2|A|1216
8BH4|1|2|C|1217

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain r

30S ribosomal protein S14

Chain w

30S ribosomal protein S19