J3_8BHJ_013

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

GUCUUG*CAG*CUUACGAC

Length

17 nucleotides

Bulged bases

8BHJ|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|2|G|988
8BHJ|1|2|U|989
8BHJ|1|2|C|990
8BHJ|1|2|U|991
8BHJ|1|2|U|992
8BHJ|1|2|G|993
*
8BHJ|1|2|C|1045
8BHJ|1|2|A|1046
8BHJ|1|2|G|1047
*
8BHJ|1|2|C|1210
8BHJ|1|2|U|1211
8BHJ|1|2|U|1212
8BHJ|1|2|A|1213
8BHJ|1|2|C|1214
8BHJ|1|2|G|1215
8BHJ|1|2|A|1216
8BHJ|1|2|C|1217

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain r

30S ribosomal protein S14

Chain w

30S ribosomal protein S19