J3_8BHJ_026

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

CAUCC*GGUA*UUUAAAG

Length

16 nucleotides

Bulged bases

8BHJ|1|0|A|2518

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|C|2517
8BHJ|1|0|A|2518
8BHJ|1|0|U|2519
8BHJ|1|0|C|2520
8BHJ|1|0|C|2521
*
8BHJ|1|0|G|2544
8BHJ|1|0|G|2545
8BHJ|1|0|U|2546
8BHJ|1|0|A|2547
*
8BHJ|1|0|U|2561
8BHJ|1|0|U|2562
8BHJ|1|0|U|2563
8BHJ|1|0|A|2564
8BHJ|1|0|A|2565
8BHJ|1|0|A|2566
8BHJ|1|0|G|2567

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain H

50S ribosomal protein L14