J3_8BHJ_033

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

CAAG*CUAGUAAU*GUGAAUACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|2|C|936
8BHJ|1|2|A|937
8BHJ|1|2|A|938
8BHJ|1|2|G|939
*
8BHJ|1|2|C|1344
8BHJ|1|2|U|1345
8BHJ|1|2|A|1346
8BHJ|1|2|G|1347
8BHJ|1|2|U|1348
8BHJ|1|2|A|1349
8BHJ|1|2|A|1350
8BHJ|1|2|U|1351
*
8BHJ|1|2|G|1371
8BHJ|1|2|U|1372
8BHJ|1|2|G|1373
8BHJ|1|2|A|1374
8BHJ|1|2|A|1375
8BHJ|1|2|U|1376
8BHJ|1|2|A|1377
8BHJ|1|2|C|1378
8BHJ|1|2|G|1379

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain k

30S ribosomal protein S7

Chain m

30S ribosomal protein S9