3D structure

PDB id
8BHN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
GUGGA*UAC*GGAAU
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BHN|1|2|G|942
8BHN|1|2|U|943
8BHN|1|2|G|944
8BHN|1|2|G|945
8BHN|1|2|A|946
*
8BHN|1|2|U|1235
8BHN|1|2|A|1236
8BHN|1|2|C|1237
*
8BHN|1|2|G|1337
8BHN|1|2|G|1338
8BHN|1|2|A|1339
8BHN|1|2|A|1340
8BHN|1|2|U|1341

Current chains

Chain 2
16S rRNA RRSB-RRNA

Nearby chains

Chain 4
Transfer RNA; tRNA
Chain k
30S ribosomal protein S7
Chain m
30S ribosomal protein S9
Chain q
30S ribosomal protein S13

Coloring options:

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