J3_8BHP_017

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

8BHP|1|2|U|1240, 8BHP|1|2|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHP|1|2|C|1237
8BHP|1|2|A|1238
8BHP|1|2|A|1239
8BHP|1|2|U|1240
8BHP|1|2|G|1241
*
8BHP|1|2|C|1296
8BHP|1|2|G|1297
8BHP|1|2|U|1298
8BHP|1|2|A|1299
8BHP|1|2|G|1300
8BHP|1|2|U|1301
8BHP|1|2|C|1302
8BHP|1|2|C|1303
8BHP|1|2|G|1304
8BHP|1|2|G|1305
8BHP|1|2|A|1306
8BHP|1|2|U|1307
8BHP|1|2|U|1308
*
8BHP|1|2|A|1329
8BHP|1|2|U|1330
8BHP|1|2|G|1331
8BHP|1|2|A|1332
8BHP|1|2|A|1333
8BHP|1|2|G|1334
8BHP|1|2|U|1335
8BHP|1|2|C|1336
8BHP|1|2|G|1337

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain k

30S ribosomal protein S7

Chain q

30S ribosomal protein S13