J3_8BHP_034

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUCUUGACAU*ACAG*CUUACGAC

Length

22 nucleotides

Bulged bases

8BHP|1|2|U|1212, 8BHP|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHP|1|2|G|988
8BHP|1|2|U|989
8BHP|1|2|C|990
8BHP|1|2|U|991
8BHP|1|2|U|992
8BHP|1|2|G|993
8BHP|1|2|A|994
8BHP|1|2|C|995
8BHP|1|2|A|996
8BHP|1|2|U|997
*
8BHP|1|2|A|1044
8BHP|1|2|C|1045
8BHP|1|2|A|1046
8BHP|1|2|G|1047
*
8BHP|1|2|C|1210
8BHP|1|2|U|1211
8BHP|1|2|U|1212
8BHP|1|2|A|1213
8BHP|1|2|C|1214
8BHP|1|2|G|1215
8BHP|1|2|A|1216
8BHP|1|2|C|1217

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain r

30S ribosomal protein S14

Chain w

30S ribosomal protein S19