J3_8BIL_035

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

8BIL|1|2|U|1240, 8BIL|1|2|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BIL|1|2|C|1237
8BIL|1|2|A|1238
8BIL|1|2|A|1239
8BIL|1|2|U|1240
8BIL|1|2|G|1241
*
8BIL|1|2|C|1296
8BIL|1|2|G|1297
8BIL|1|2|U|1298
8BIL|1|2|A|1299
8BIL|1|2|G|1300
8BIL|1|2|U|1301
8BIL|1|2|C|1302
8BIL|1|2|C|1303
8BIL|1|2|G|1304
8BIL|1|2|G|1305
8BIL|1|2|A|1306
8BIL|1|2|U|1307
8BIL|1|2|U|1308
*
8BIL|1|2|A|1329
8BIL|1|2|U|1330
8BIL|1|2|G|1331
8BIL|1|2|A|1332
8BIL|1|2|A|1333
8BIL|1|2|G|1334
8BIL|1|2|U|1335
8BIL|1|2|C|1336
8BIL|1|2|G|1337

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain k

30S ribosomal protein S7

Chain q

30S ribosomal protein S13