J3_8BIM_013

3D structure

PDB id

8BIM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GUCUUG*CAG*CUUACGAC

Length

17 nucleotides

Bulged bases

8BIM|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BIM|1|2|G|988
8BIM|1|2|U|989
8BIM|1|2|C|990
8BIM|1|2|U|991
8BIM|1|2|U|992
8BIM|1|2|G|993
*
8BIM|1|2|C|1045
8BIM|1|2|A|1046
8BIM|1|2|G|1047
*
8BIM|1|2|C|1210
8BIM|1|2|U|1211
8BIM|1|2|U|1212
8BIM|1|2|A|1213
8BIM|1|2|C|1214
8BIM|1|2|G|1215
8BIM|1|2|A|1216
8BIM|1|2|C|1217

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain r

30S ribosomal protein S14

Chain w

30S ribosomal protein S19