J3_8BIM_034

3D structure

PDB id

8BIM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GAAGUUU*GAGAAUGU*AC

Length

17 nucleotides

Bulged bases

8BIM|1|2|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BIM|1|2|G|1003
8BIM|1|2|A|1004
8BIM|1|2|A|1005
8BIM|1|2|G|1006
8BIM|1|2|U|1007
8BIM|1|2|U|1008
8BIM|1|2|U|1009
*
8BIM|1|2|G|1018
8BIM|1|2|A|1019
8BIM|1|2|G|1020
8BIM|1|2|A|1021
8BIM|1|2|A|1022
8BIM|1|2|U|1023
8BIM|1|2|G|1024
8BIM|1|2|U|1025
*
8BIM|1|2|A|1036
8BIM|1|2|C|1037

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain g

30S ribosomal protein S3

Chain r

30S ribosomal protein S14