J3_8BRM_019
3D structure
- PDB id
- 8BRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state, no E-site tRNA (A6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CCCG*CCCAG*CGGGAG
- Length
- 15 nucleotides
- Bulged bases
- 8BRM|1|St|G|835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BRM|1|St|C|791
8BRM|1|St|C|792
8BRM|1|St|C|793
8BRM|1|St|G|794
*
8BRM|1|St|C|822
8BRM|1|St|C|823
8BRM|1|St|C|824
8BRM|1|St|A|825
8BRM|1|St|G|826
*
8BRM|1|St|C|833
8BRM|1|St|G|834
8BRM|1|St|G|835
8BRM|1|St|G|836
8BRM|1|St|A|837
8BRM|1|St|G|838
Current chains
- Chain St
- Small Subunit rRNA
Nearby chains
- Chain SA
- Ribosomal protein SA
- Chain SB
- Ribosomal protein S2
- Chain SJ
- Ribosomal protein S15A
- Chain SY
- Ribosomal protein S21
- Chain Sd
- Ribosomal protein S26
- Chain Se
- Ribosomal protein S27
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