J3_8BTK_014

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|G|1908
8BTK|1|B5|A|1909
8BTK|1|B5|C|1910
8BTK|1|B5|G|1911
*
8BTK|1|B5|C|1933
8BTK|1|B5|G|1934
8BTK|1|B5|C|1935
8BTK|1|B5|U|1936
8BTK|1|B5|A|1937
8BTK|1|B5|A|1938
8BTK|1|B5|G|1939
8BTK|1|B5|G|1940
*
8BTK|1|B5|C|1955
8BTK|1|B5|A|1956
8BTK|1|B5|C|1957

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bs

60S acidic ribosomal protein P0

Chain Bt

Ribosomal protein L12