J3_8BUU_023

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACAAUC*GACGUC*GC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BUU|1|a|G|1013
8BUU|1|a|A|1014
8BUU|1|a|C|1015
8BUU|1|a|A|1016
8BUU|1|a|A|1017
8BUU|1|a|U|1018
8BUU|1|a|C|1019
*
8BUU|1|a|G|1030
8BUU|1|a|A|1031
8BUU|1|a|C|1032
8BUU|1|a|G|1033
8BUU|1|a|U|1034
8BUU|1|a|C|1035
*
8BUU|1|a|G|1046
8BUU|1|a|C|1047

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14