J3_8BYV_005

3D structure

PDB id

8BYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UUGACAAC*GCCUUC*GGACAA

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BYV|1|a|U|1011
8BYV|1|a|U|1012
8BYV|1|a|G|1013
8BYV|1|a|A|1014
8BYV|1|a|C|1015
8BYV|1|a|A|1016
8BYV|1|a|A|1017
8BYV|1|a|C|1018
*
8BYV|1|a|G|1031
8BYV|1|a|C|1032
8BYV|1|a|C|1033
8BYV|1|a|U|1034
8BYV|1|a|U|1035
8BYV|1|a|C|1036
*
8BYV|1|a|G|1046
8BYV|1|a|G|1047
8BYV|1|a|A|1048
8BYV|1|a|C|1049
8BYV|1|a|A|1050
8BYV|1|a|A|1051

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14 type Z