J3_8C8X_007

3D structure

PDB id

8C8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

AAAGACC*GGAG*CGU

Length

14 nucleotides

Bulged bases

8C8X|1|A|A|2059, 8C8X|1|A|G|2061

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8X|1|A|A|2058
8C8X|1|A|A|2059
8C8X|1|A|A|2060
8C8X|1|A|G|2061
8C8X|1|A|A|2062
8C8X|1|A|C|2063
8C8X|1|A|C|2064
*
8C8X|1|A|G|2446
8C8X|1|A|G|2447
8C8X|1|A|A|2448
8C8X|1|A|G|2454
*
8C8X|1|A|C|2498
8C8X|1|A|G|2608
8C8X|1|A|U|2609

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3