J3_8C8Z_004

3D structure

PDB id

8C8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

CAAG*CCCAAACC*GGUG

Length

16 nucleotides

Bulged bases

8C8Z|1|A|C|1607, 8C8Z|1|A|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8Z|1|A|C|1306
8C8Z|1|A|A|1307
8C8Z|1|A|A|1308
8C8Z|1|A|G|1309
*
8C8Z|1|A|C|1605
8C8Z|1|A|C|1606
8C8Z|1|A|C|1607
8C8Z|1|A|A|1608
8C8Z|1|A|A|1609
8C8Z|1|A|A|1610
8C8Z|1|A|C|1611
8C8Z|1|A|C|1612
*
8C8Z|1|A|G|1619
8C8Z|1|A|G|1620
8C8Z|1|A|U|1621
8C8Z|1|A|G|1622

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34