J3_8CDU_014
3D structure
- PDB id
- 8CDU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rnase R bound to a 30S degradation intermediate (main state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCGUCAG*CGCAACC*GAUGACGUC
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CDU|1|A|G|1071
8CDU|1|A|U|1072
8CDU|1|A|C|1073
8CDU|1|A|G|1074
8CDU|1|A|U|1075
8CDU|1|A|C|1076
8CDU|1|A|A|1077
8CDU|1|A|G|1078
*
8CDU|1|A|C|1117
8CDU|1|A|G|1118
8CDU|1|A|C|1119
8CDU|1|A|A|1120
8CDU|1|A|A|1121
8CDU|1|A|C|1122
8CDU|1|A|C|1123
*
8CDU|1|A|G|1196
8CDU|1|A|A|1197
8CDU|1|A|U|1198
8CDU|1|A|G|1199
8CDU|1|A|A|1200
8CDU|1|A|C|1201
8CDU|1|A|G|1202
8CDU|1|A|U|1203
8CDU|1|A|C|1204
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- 30S ribosomal protein S3
- Chain G
- 30S ribosomal protein S5
- Chain J
- 30S ribosomal protein S9
- Chain K
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
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