J3_8CGV_005

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

CU(2MG)C*GCGUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

8CGV|1|a|U|1971

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CGV|1|a|C|1833
8CGV|1|a|U|1834
8CGV|1|a|2MG|1835
8CGV|1|a|C|1836
*
8CGV|1|a|G|1904
8CGV|1|a|C|1905
8CGV|1|a|G|1906
8CGV|1|a|U|1926
8CGV|1|a|A|1927
8CGV|1|a|A|1928
8CGV|1|a|G|1929
8CGV|1|a|G|1930
8CGV|1|a|U|1931
8CGV|1|a|A|1932
8CGV|1|a|G|1933
*
8CGV|1|a|C|1967
8CGV|1|a|G|1968
8CGV|1|a|A|1969
8CGV|1|a|A|1970
8CGV|1|a|U|1971
8CGV|1|a|G|1972

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2