J3_8CRE_011

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UU*AGAAG*CAAUUGA

Length

14 nucleotides

Bulged bases

8CRE|1|1|A|1061, 8CRE|1|1|U|1091

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_09667.1

Basepair signature

cWW-cWW-F-F-cSS-F-F-cWW

Number of instances in this motif group

2

Unit IDs

8CRE|1|1|U|982
8CRE|1|1|U|983
*
8CRE|1|1|A|1058
8CRE|1|1|G|1059
8CRE|1|1|A|1060
8CRE|1|1|A|1061
8CRE|1|1|G|1062
*
8CRE|1|1|C|1088
8CRE|1|1|A|1089
8CRE|1|1|A|1090
8CRE|1|1|U|1091
8CRE|1|1|U|1092
8CRE|1|1|G|1093
8CRE|1|1|A|1094

Current chains

Chain 1

25S

Nearby chains

Chain 2

60S ribosomal protein L21-A

Chain AC

60S ribosomal protein L29

Chain o

60S ribosomal protein L7-A