J3_8CRE_023

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

8CRE|1|1|A|2859, 8CRE|1|1|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_62630.1

Basepair signature

cWW-cWH-cWW-cSS-tWW-tSS-F-cWW-F

Number of instances in this motif group

2

Unit IDs

8CRE|1|1|U|2858
8CRE|1|1|A|2859
8CRE|1|1|U|2860
8CRE|1|1|C|2861
*
8CRE|1|1|G|2886
8CRE|1|1|U|2887
8CRE|1|1|U|2888
*
8CRE|1|1|A|2902
8CRE|1|1|C|2903
8CRE|1|1|U|2904
8CRE|1|1|A|2905
8CRE|1|1|A|2906
8CRE|1|1|U|2907
8CRE|1|1|A|2908

Current chains

Chain 1

25S

Nearby chains

Chain 6

60S ribosomal protein L23-A

Chain k

60S ribosomal protein L3

Chain w

Ribosomal protein L13