J3_8CRE_029
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGAAG*CGACG
- Length
- 32 nucleotides
- Bulged bases
- 8CRE|1|AS|U|116, 8CRE|1|AS|G|119, 8CRE|1|AS|A|120, 8CRE|1|AS|U|146, 8CRE|1|AS|A|155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CRE|1|AS|C|112
8CRE|1|AS|A|113
8CRE|1|AS|A|114
8CRE|1|AS|A|115
8CRE|1|AS|U|116
8CRE|1|AS|U|117
8CRE|1|AS|U|118
8CRE|1|AS|G|119
8CRE|1|AS|A|120
8CRE|1|AS|A|121
8CRE|1|AS|A|122
8CRE|1|AS|U|123
*
8CRE|1|AS|A|143
8CRE|1|AS|G|144
8CRE|1|AS|U|145
8CRE|1|AS|U|146
8CRE|1|AS|G|147
8CRE|1|AS|U|148
8CRE|1|AS|A|149
8CRE|1|AS|A|150
8CRE|1|AS|U|151
8CRE|1|AS|U|152
8CRE|1|AS|U|153
8CRE|1|AS|G|154
8CRE|1|AS|A|155
8CRE|1|AS|A|156
8CRE|1|AS|G|157
*
8CRE|1|AS|C|263
8CRE|1|AS|G|264
8CRE|1|AS|A|265
8CRE|1|AS|C|266
8CRE|1|AS|G|267
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AU
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S ribosomal protein L8
- Chain BG
- 60S ribosomal protein L13
- Chain BI
- 60S ribosomal protein L15-A
- Chain CC
- Ribosomal protein L29
- Chain CD
- 60S ribosomal protein L36
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