J3_8CRE_084
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAC*GGAC*GUUU
- Length
- 11 nucleotides
- Bulged bases
- 8CRE|1|CM|U|1399, 8CRE|1|CM|U|1400
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.5
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|CM|A|1321
8CRE|1|CM|A|1322
8CRE|1|CM|C|1323
*
8CRE|1|CM|G|1372
8CRE|1|CM|G|1373
8CRE|1|CM|A|1374
8CRE|1|CM|C|1375
*
8CRE|1|CM|G|1398
8CRE|1|CM|U|1399
8CRE|1|CM|U|1400
8CRE|1|CM|U|1401
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CS
- Ribosomal protein S7
- Chain DD
- 40S ribosomal protein S16
- Chain DE
- 40S ribosomal protein S17-B
- Chain DH
- Ribosomal protein S10
- Chain DQ
- 40S ribosomal protein S29A
- Chain DT
- Guanine nucleotide-binding protein subunit beta-like protein
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