J3_8CSQ_002

3D structure

PDB id

8CSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

8CSQ|1|A|A|688, 8CSQ|1|A|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSQ|1|A|G|687
8CSQ|1|A|A|688
8CSQ|1|A|U|689
8CSQ|1|A|U|690
*
8CSQ|1|A|A|823
8CSQ|1|A|U|824
8CSQ|1|A|U|825
8CSQ|1|A|A|826
8CSQ|1|A|A|827
8CSQ|1|A|C|828
8CSQ|1|A|C|829
8CSQ|1|A|U|830
*
8CSQ|1|A|A|856
8CSQ|1|A|G|857
8CSQ|1|A|C|858

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial