3D structure

PDB id
8CSR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial small subunit assembly intermediate (State C)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.54 Å

Loop

Sequence
CUC*GCAGUAA*UGAACAG
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8CSR|1|A|C|1192
8CSR|1|A|U|1193
8CSR|1|A|C|1194
*
8CSR|1|A|G|1428
8CSR|1|A|C|1429
8CSR|1|A|A|1430
8CSR|1|A|G|1431
8CSR|1|A|U|1432
8CSR|1|A|A|1433
8CSR|1|A|A|1434
*
8CSR|1|A|U|1456
8CSR|1|A|G|1457
8CSR|1|A|A|1458
8CSR|1|A|A|1459
8CSR|1|A|C|1460
8CSR|1|A|A|1461
8CSR|1|A|G|1462

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 7
Methyltransferase-like protein 17, mitochondrial
Chain F
28S ribosomal protein S7, mitochondrial
Chain G
28S ribosomal protein S9, mitochondrial

Coloring options:

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