J3_8CSS_001

3D structure

PDB id

8CSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.36 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSS|1|A|C|677
8CSS|1|A|U|678
8CSS|1|A|C|679
8CSS|1|A|U|680
*
8CSS|1|A|A|866
8CSS|1|A|C|867
8CSS|1|A|C|868
8CSS|1|A|C|869
8CSS|1|A|C|870
8CSS|1|A|A|871
8CSS|1|A|G|872
*
8CSS|1|A|C|917
8CSS|1|A|A|918
8CSS|1|A|A|919
8CSS|1|A|G|920

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial