J3_8CSS_006

3D structure

PDB id

8CSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.36 Å

Loop

Sequence

UGUAAUCG*CAC*GCAA

Length

15 nucleotides

Bulged bases

8CSS|1|A|A|1353

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSS|1|A|U|1210
8CSS|1|A|G|1211
8CSS|1|A|U|1212
8CSS|1|A|A|1213
8CSS|1|A|A|1214
8CSS|1|A|U|1215
8CSS|1|A|C|1216
8CSS|1|A|G|1217
*
8CSS|1|A|C|1236
8CSS|1|A|A|1237
8CSS|1|A|C|1238
*
8CSS|1|A|G|1351
8CSS|1|A|C|1352
8CSS|1|A|A|1353
8CSS|1|A|A|1354

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Methyltransferase-like protein 17, mitochondrial