J3_8CST_002

3D structure

PDB id

8CST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

8CST|1|A|A|688, 8CST|1|A|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CST|1|A|G|687
8CST|1|A|A|688
8CST|1|A|U|689
8CST|1|A|U|690
*
8CST|1|A|A|823
8CST|1|A|U|824
8CST|1|A|U|825
8CST|1|A|A|826
8CST|1|A|A|827
8CST|1|A|C|828
8CST|1|A|C|829
8CST|1|A|U|830
*
8CST|1|A|A|856
8CST|1|A|G|857
8CST|1|A|C|858

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial