J3_8CST_004
3D structure
- PDB id
- 8CST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- AGGAG*CUAC*GGAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CST|1|A|A|1198
8CST|1|A|G|1199
8CST|1|A|G|1200
8CST|1|A|A|1201
8CST|1|A|G|1202
*
8CST|1|A|C|1363
8CST|1|A|U|1364
8CST|1|A|A|1365
8CST|1|A|C|1366
*
8CST|1|A|G|1421
8CST|1|A|G|1422
8CST|1|A|A|1423
8CST|1|A|U|1424
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 7
- Methyltransferase-like protein 17, mitochondrial
- Chain F
- 28S ribosomal protein S7, mitochondrial
Coloring options: