J3_8CST_005
3D structure
- PDB id
- 8CST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- UCUGUAAUC*GAUCAACCUCAC*GCAAGAA
- Length
- 28 nucleotides
- Bulged bases
- 8CST|1|A|U|1229, 8CST|1|A|C|1230, 8CST|1|A|A|1353
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CST|1|A|U|1208
8CST|1|A|C|1209
8CST|1|A|U|1210
8CST|1|A|G|1211
8CST|1|A|U|1212
8CST|1|A|A|1213
8CST|1|A|A|1214
8CST|1|A|U|1215
8CST|1|A|C|1216
*
8CST|1|A|G|1227
8CST|1|A|A|1228
8CST|1|A|U|1229
8CST|1|A|C|1230
8CST|1|A|A|1231
8CST|1|A|A|1232
8CST|1|A|C|1233
8CST|1|A|C|1234
8CST|1|A|U|1235
8CST|1|A|C|1236
8CST|1|A|A|1237
8CST|1|A|C|1238
*
8CST|1|A|G|1351
8CST|1|A|C|1352
8CST|1|A|A|1353
8CST|1|A|A|1354
8CST|1|A|G|1355
8CST|1|A|A|1356
8CST|1|A|A|1357
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 7
- Methyltransferase-like protein 17, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
Coloring options: