J3_8CVK_058
3D structure
- PDB id
- 8CVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GGAG*CUUUAAAGAGUG*CUCAC
- Length
- 21 nucleotides
- Bulged bases
- 8CVK|1|1A|U|1081, 8CVK|1|1A|A|1088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CVK|1|1A|G|1055
8CVK|1|1A|G|1056
8CVK|1|1A|A|1057
8CVK|1|1A|G|1058
*
8CVK|1|1A|C|1080
8CVK|1|1A|U|1081
8CVK|1|1A|U|1082
8CVK|1|1A|U|1083
8CVK|1|1A|A|1084
8CVK|1|1A|A|1085
8CVK|1|1A|A|1086
8CVK|1|1A|G|1087
8CVK|1|1A|A|1088
8CVK|1|1A|G|1089
8CVK|1|1A|U|1090
8CVK|1|1A|G|1091
*
8CVK|1|1A|C|1100
8CVK|1|1A|U|1101
8CVK|1|1A|C|1102
8CVK|1|1A|A|1103
8CVK|1|1A|C|1104
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L36
Coloring options: