J3_8CVL_050

3D structure

PDB id

8CVL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVL|1|2a|G|1002
8CVL|1|2a|G|1003
8CVL|1|2a|A|1004
8CVL|1|2a|A|1005
8CVL|1|2a|C|1006
*
8CVL|1|2a|G|1023
8CVL|1|2a|G|1024
8CVL|1|2a|U|1025
8CVL|1|2a|G|1026
8CVL|1|2a|C|1027
8CVL|1|2a|C|1028
*
8CVL|1|2a|G|1033
8CVL|1|2a|G|1034
8CVL|1|2a|A|1035
8CVL|1|2a|G|1036
8CVL|1|2a|C|1037
8CVL|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains