J3_8E3L_017

3D structure

PDB id

8E3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to D-linker solithromycin conjugate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CUGA*UCUAAC*GGACAG

Length

16 nucleotides

Bulged bases

8E3L|1|I|A|2198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3L|1|I|C|2091
8E3L|1|I|U|2092
8E3L|1|I|G|2093
8E3L|1|I|A|2094
*
8E3L|1|I|U|2195
8E3L|1|I|C|2196
8E3L|1|I|U|2197
8E3L|1|I|A|2198
8E3L|1|I|A|2199
8E3L|1|I|C|2200
*
8E3L|1|I|G|2223
8E3L|1|I|G|2224
8E3L|1|I|A|2225
8E3L|1|I|C|2226
8E3L|1|I|A|2227
8E3L|1|I|G|2228

Current chains

Chain I

50S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2