J3_8E43_015

3D structure

PDB id

8E43 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3336

Experimental method

ELECTRON MICROSCOPY

Resolution

2.09 Å

Loop

Sequence

GA*UUAAAGAAAG*CUCAC

Length

17 nucleotides

Bulged bases

8E43|1|I|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E43|1|I|G|1056
8E43|1|I|A|1057
*
8E43|1|I|U|1082
8E43|1|I|U|1083
8E43|1|I|A|1084
8E43|1|I|A|1085
8E43|1|I|A|1086
8E43|1|I|G|1087
8E43|1|I|A|1088
8E43|1|I|A|1089
8E43|1|I|A|1090
8E43|1|I|G|1091
*
8E43|1|I|C|1100
8E43|1|I|U|1101
8E43|1|I|C|1102
8E43|1|I|A|1103
8E43|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains