J3_8E46_016

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CAGGA*UUAAAGAAAG*CUCACUG

Length

22 nucleotides

Bulged bases

8E46|1|I|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|C|1053
8E46|1|I|A|1054
8E46|1|I|G|1055
8E46|1|I|G|1056
8E46|1|I|A|1057
*
8E46|1|I|U|1082
8E46|1|I|U|1083
8E46|1|I|A|1084
8E46|1|I|A|1085
8E46|1|I|A|1086
8E46|1|I|G|1087
8E46|1|I|A|1088
8E46|1|I|A|1089
8E46|1|I|A|1090
8E46|1|I|G|1091
*
8E46|1|I|C|1100
8E46|1|I|U|1101
8E46|1|I|C|1102
8E46|1|I|A|1103
8E46|1|I|C|1104
8E46|1|I|U|1105
8E46|1|I|G|1106

Current chains

Chain I

23S ribosomal RNA

Nearby chains