J3_8E47_015

3D structure

PDB id

8E47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC26

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

ACAUC*GUA*UUUAAAGU

Length

16 nucleotides

Bulged bases

8E47|1|I|A|2518, 8E47|1|I|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E47|1|I|A|2516
8E47|1|I|C|2517
8E47|1|I|A|2518
8E47|1|I|U|2519
8E47|1|I|C|2520
*
8E47|1|I|G|2545
8E47|1|I|U|2546
8E47|1|I|A|2547
*
8E47|1|I|U|2561
8E47|1|I|U|2562
8E47|1|I|U|2563
8E47|1|I|A|2564
8E47|1|I|A|2565
8E47|1|I|A|2566
8E47|1|I|G|2567
8E47|1|I|U|2568

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L13