J3_8EV6_071

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

CCUUGACAU*ACAG*CUUACGG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|2a|C|989
8EV6|1|2a|C|990
8EV6|1|2a|U|991
8EV6|1|2a|U|992
8EV6|1|2a|G|993
8EV6|1|2a|A|994
8EV6|1|2a|C|995
8EV6|1|2a|A|996
8EV6|1|2a|U|997
*
8EV6|1|2a|A|1044
8EV6|1|2a|C|1045
8EV6|1|2a|A|1046
8EV6|1|2a|G|1047
*
8EV6|1|2a|C|1210
8EV6|1|2a|U|1211
8EV6|1|2a|U|1212
8EV6|1|2a|A|1213
8EV6|1|2a|C|1214
8EV6|1|2a|G|1215
8EV6|1|2a|G|1216

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z