J3_8EV6_075

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

GGAACC*GGGUGCC*GGAGCC

Length

19 nucleotides

Bulged bases

8EV6|1|1a|G|1003

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|1a|G|1002
8EV6|1|1a|G|1003
8EV6|1|1a|A|1004
8EV6|1|1a|A|1005
8EV6|1|1a|C|1006
8EV6|1|1a|C|1007
*
8EV6|1|1a|G|1022
8EV6|1|1a|G|1023
8EV6|1|1a|G|1024
8EV6|1|1a|U|1025
8EV6|1|1a|G|1026
8EV6|1|1a|C|1027
8EV6|1|1a|C|1028
*
8EV6|1|1a|G|1033
8EV6|1|1a|G|1034
8EV6|1|1a|A|1035
8EV6|1|1a|G|1036
8EV6|1|1a|C|1037
8EV6|1|1a|C|1038

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains