J3_8EVS_003
3D structure
- PDB id
- 8EVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- UAG*CGUA(OMG)C*GUCGA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVS|1|A1|U|829
8EVS|1|A1|A|830
8EVS|1|A1|G|831
*
8EVS|1|A1|C|863
8EVS|1|A1|G|864
8EVS|1|A1|U|865
8EVS|1|A1|A|866
8EVS|1|A1|OMG|867
8EVS|1|A1|C|868
*
8EVS|1|A1|G|891
8EVS|1|A1|U|892
8EVS|1|A1|C|893
8EVS|1|A1|G|894
8EVS|1|A1|A|895
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AR
- 60S ribosomal protein L19-A
- Chain Ag
- 60S ribosomal protein L34-A
- Chain Aj
- 60S ribosomal protein L37-A
- Chain Ap
- 60S ribosomal protein L43-A
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