J3_8EYQ_015

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8EYQ|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8EYQ_015 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1565

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8EYQ|1|A|C|990
8EYQ|1|A|U|991
8EYQ|1|A|U|992
8EYQ|1|A|G|993
8EYQ|1|A|A|994
8EYQ|1|A|C|995
8EYQ|1|A|A|996
8EYQ|1|A|U|997
*
8EYQ|1|A|A|1044
8EYQ|1|A|C|1045
8EYQ|1|A|A|1046
8EYQ|1|A|G|1047
*
8EYQ|1|A|C|1210
8EYQ|1|A|U|1211
8EYQ|1|A|U|1212
8EYQ|1|A|A|1213
8EYQ|1|A|C|1214
8EYQ|1|A|G|1215

Current chains

Chain A

16S_rRNA

Nearby chains

Chain N

30S ribosomal protein S14