J3_8EYT_016

3D structure

PDB id

8EYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA+KsgA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8EYT|1|A|U|1212, 8EYT|1|A|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8EYT_016 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1671

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8EYT|1|A|C|990
8EYT|1|A|U|991
8EYT|1|A|U|992
8EYT|1|A|G|993
8EYT|1|A|A|994
8EYT|1|A|C|995
8EYT|1|A|A|996
8EYT|1|A|U|997
*
8EYT|1|A|A|1044
8EYT|1|A|C|1045
8EYT|1|A|A|1046
8EYT|1|A|G|1047
*
8EYT|1|A|C|1210
8EYT|1|A|U|1211
8EYT|1|A|U|1212
8EYT|1|A|A|1213
8EYT|1|A|C|1214
8EYT|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14